Epigenetics Hackathon at ecSeq


Posted on August 01, 2018


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Right now, three dedicated PhD students, majoring in bioinformatics, are developing a comprehensive software pipeline for the analysis of Bisulfite-Seq data. This software will be used to analyze all incoming bisulfite-treated sequencing data from the EpiDiverse Training Network.

The software will automatically perform the following steps:

  • Raw sequence quality control
  • Adapter clipping
  • Read mapping
  • Mapping quality control
  • Methylation calling
  • DMP calling
  • DMR calling

Meet the PhD students

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Nilay Can (Philipps University Marburg)
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Samar Fatma (Martin Luther University Halle-Wittenberg)
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Adam Nunn (ecSeq Bioinformatics GmbH)

Some impressions

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